Demo

Example program

To run the example program (whose code is available at bin/main.rs), enter

cargo run --bin rpt -- --rpt /.../.../phenopacket-store/notebooks/CD28/input/CD28_IMD123_individuals.xlsx --json /.../.../hp.json 

Adjust the paths to an Excel legacy template and the hp.json file as needed.

For faster performance, enter

cargo run --features="cli"  --release --bin rpt -- --template ./../phenopacket-store/notebooks/CD28/input/CD28_IMD123_individuals.xlsx --json ./../../data/hpo/hp.json 

To build the binary demo (with clap)

cargo build --release --features cli

(the binary is then in ./target/release/rpt) to run it

cargo run --features cli --bin rpt

To see private features in documentation

cargo doc --document-private-items --open