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Extracting phenopackets from Cohort files ​

The phenoboard app stores data in form of Cohort files (json). We can extract all of the phenopackets from one such file or a directory containing multiple such files using the following command

bash
phetools extract -i ../mgd-ppkt/cohorts -o <directory> --hpo hp.json

Where <directory> is an existing directory and hp.json should have the complete path to a downloaded hp.json file.