Getting Started

Fenominal is a high-performance HPO-based text mining engine written in Rust, with Python bindings for integration into data science workflows.

It implements the algorithm described in:

Groza T, et al. (2023)
Term-BLAST-like alignment tool for concept recognition in noisy clinical texts
Bioinformatics 39(12): btad716
https://pubmed.ncbi.nlm.nih.gov/38001031/

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Available Interfaces

Fenominal is available in two implementations:

• Rust API → Rust Guide
• Python API → Python Guide